I have been trying to setup wakeonlan on my desktop which uses an Asus M3N72-D and is running Kubuntu 12.04 64bit. I believe I have setup the bios correctly. I have enabled PME. I didn't find any other setting that mentioned wake on lan except EuP which I have disabled (it turns off WOL in the S5 state). In my rc.config put:

sudo ethtool -s eth0 wol g

But that hasn't resolved the problem. Some things that might hint at a solution are that presently if I go into standby the computer will not come out of standby, and when I shutdown the computer the lights next the ethernet port always turn off.

I also ran wireshark while the computer was running and saw that the magic packet is able to reach the desktop with the correct MAC address.

Here is the results for ethtool eth0

    Settings for eth0:

    Supported ports: [ TP MII ]

    Supported link modes:   10baseT/Half 10baseT/Full 

                            100baseT/Half 100baseT/Full 

                            1000baseT/Half 1000baseT/Full 

    Supported pause frame use: No

    Supports auto-negotiation: Yes

    Advertised link modes:  10baseT/Half 10baseT/Full 

                            100baseT/Half 100baseT/Full 

                            1000baseT/Half 1000baseT/Full 

    Advertised pause frame use: Symmetric Receive-only

    Advertised auto-negotiation: Yes

    Link partner advertised link modes:  10baseT/Half 10baseT/Full 

                                         100baseT/Half 100baseT/Full 

                                         1000baseT/Full 

    Link partner advertised pause frame use: Symmetric

    Link partner advertised auto-negotiation: Yes

    Speed: 1000Mb/s

    Duplex: Full

    Port: MII

    PHYAD: 0

    Transceiver: internal

    Auto-negotiation: on

    Supports Wake-on: pumbg

    Wake-on: g

    Current message level: 0x00000033 (51)

                           drv probe ifdown ifup

    Link detected: yes

Is there anything else I can try to fix the problem?